rs107976276 SNP Detail

Summary

• ID
  rs107976276
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:124194611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TGCCTCCGCC TCCCGGTTAA TTTGCATATT CTAGAGTGGA
  GAAAGCACAG AGCATGGGGG GGGTGGTGGC GAGGGGGGTG GGAGAAGAGC ATATGCAAAA
  S
  TTCAATGAAT ATGCAAATGA TACGCGATCC GTTCGCCGTT CGGAGGGCGG GGCCCTCATT
  TGCATATTTA TGAGAGGAAC CGAATGCTGT GGTGTAATTA T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134041049	ENSMUSSNP5873042	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107976276					SNP	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:124194611 () rs orientation: forward

Symbol	Name	Function Class
4930526I15Rik	RIKEN cDNA 4930526I15 gene	514 bp downstream
Ppp2r3d	protein phosphatase 2 (formerly 2A), regulatory subunit B'', delta	801 bp upstream
Tssr3095	transcription start site region 3095	1807 bp upstream
Tssr3096	transcription start site region 3096	1727 bp upstream
Tssr3097	transcription start site region 3097	1651 bp upstream
Tssr3098	transcription start site region 3098	1300 bp upstream
Tssr3099	transcription start site region 3099	1197 bp upstream
Tssr3100	transcription start site region 3100	1172 bp upstream
Tssr3101	transcription start site region 3101	1060 bp upstream
Tssr3102	transcription start site region 3102	917 bp upstream
Tssr3103	transcription start site region 3103	875 bp upstream
Tssr3104	transcription start site region 3104	783 bp upstream
Tssr3105	transcription start site region 3105	673 bp upstream