rs107978933 SNP Detail

Summary

• ID
  rs107978933
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151047164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGGCGAAGGA GAATGCTCCT TAAGAGGGAC GGGGTTTCGT
  TCTCTCTTTT CTCTTGCTTC TTGCTCTCTT GCTTCCTGCA CCCTGGCTCC TGAAGATGTA
  M
  GAAATAAAGC TTTGCCGCAG AAGATTCTGG TCTGTGGTGT TCTTCCTGGC CGGTCGTGAG
  AACGCGTCTA ATAACAATTG GTGCCGAATT CCGGGACGAG A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147954948	ENSMUSSNP5402073	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107978933					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151047164 () rs orientation: forward

Symbol	Name	Function Class
Gm14149	predicted gene 14149	within coordinates
Gm52498	predicted gene, 52498	905 bp upstream