rs107992417 SNP Detail

Summary

• ID
  rs107992417
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:27457226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTATAGAG CAGGCTGGCC
  TTGAACTCAG ATCCAGCTGC CTGACTCCAG AGTGCTGGGT TCAAAGGTAT GTGCCAACAC
  TGCCTGGCTG AGACATCCTG TCTCAGGAAG TAGGATAGAG AGTGATAGGG CAGGGCACTG
  GGTACCATCC TCTAGCTTCC AAGCACAAGC AGATGTATGG ACATCTGCAC ATACTACAAT
  Y
  ATATCATATT CACATACAAA TATATATACA TGCACACACA TGTACATATA CATGTGCACA
  CATACATACA TATATACACA CCCATGTATA CATGCATGCA TATATATGCA CACATGCATA
  TACATATACA CATATACACC CATGCACACA TATATATGTG TGTGTGTATA TGTACATACA
  TACACTTCTG TGCTCTCACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss137466146	ENSMUSSNP4877547	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107992417					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:27457226 () rs orientation: forward

Symbol	Name	Function Class
Rr255813	regulatory region 255813	1375 bp proximal
Rr259986	regulatory region 259986	975 bp proximal