rs107993543 SNP Detail

Summary

• ID
  rs107993543
• Variation Type
  SNP
• Alleles
  A/C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23006088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TCTGGCATTA CACTATCACT TTAATAAAAG CTAGGTCACT
  GCCTTACACA GGAATTTAGC ATCAACTAGG AAAAAGGAAG TTTAAGACCT AAAGAGGAAC
  V
  AGAGTAGATA CTTAGAACTG TAGATAGCTG AGTTACACCC ATACACAAGT ATTTACAATG
  GCCTAAGAGA AAGGTGAACT ACCAAAACTG GTTTTCAACC T                    
  
  V = A/C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134434950	ENSMUSSNP6694982	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	G
ss147806928	ENSMUSSNP1580285	ENSEMBL	ENSEMBL_Sanger	r	SNP		T
ss147897120	ENSMUSSNP2173377	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107993543					SNP	?	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23006088 () rs orientation: forward

Symbol	Name	Function Class
Rr285916	regulatory region 285916	within coordinates
Rr285917	regulatory region 285917	770 bp proximal