rs108000448 SNP Detail

Summary

• ID
  rs108000448
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78979791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GCTGACCTAG CTAGCAAAGT AGCCCAGAAT GGTCTGACTT
  GAAGTCATGC TTCTTAGTCC TGATGGTTGG CAGTGACTTT CCTTTCCTGG GTGTTAATGG
  T
  CTATGTGTTA CCTTGGTGCC TTGCCCGTAA TCCGGTGCCT GAGCTTGGTG CCTAGTGCAG
  AAGGTGATTG TGGGACAACT TGTGCTCTCT GAGCCAAGGG T                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148192432	ENSMUSSNP4950314	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108000448					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78979791 () rs orientation: forward

Symbol	Name	Function Class
Eif3l	eukaryotic translation initiation factor 3, subunit L	1191 bp downstream
Gm25072	predicted gene, 25072	534 bp upstream
Rr505520	regulatory region 505520	1826 bp distal
Rr505521	regulatory region 505521	1029 bp proximal
Rr505522	regulatory region 505522	1569 bp proximal