rs108018898 SNP Detail

Summary

• ID
  rs108018898
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:37231268 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TCTGGTATTT CTACAGCTTG GGTTTTGGAG ACTTTCTTAG
  GTGGGCACCA GAGACTACAA GGGGACATAT TTTTGTAAAT CTTTGTGGAG GAGGGTCCTG
  R
  CACAGATCCC TCATGGGAAA TGAGGTCCGG CTCTAGTAGA CACAGTGGTA TGCTTCTCCT
  ACCTTTCAGG TTGACACCCC TTGGCACCAG GCCTTGTAGC T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148880355	ENSMUSSNP3881229	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108018898					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:37231268 () rs orientation: forward

Symbol	Name	Function Class
F13a1	coagulation factor XIII, A1 subunit	within coordinates
Rr271551	regulatory region 271551	1868 bp distal
Rr279043	regulatory region 279043	1950 bp distal
Rr281233	regulatory region 281233	1132 bp proximal
Rr283270	regulatory region 283270	1468 bp distal
Tssr122104	transcription start site region 122104	1890 bp downstream
Tssr122105	transcription start site region 122105	1911 bp downstream