rs108025051 SNP Detail

Summary

• ID
  rs108025051
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131318875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGGAGATAG TGGGTGGATC CTTGCATACA GACAGAAAGC
  ACGGGTGCCT TTGGGATTTG GCAGGAAGTT CCTGCTCACT GTGTGGCAGA GCGGGAAGCG
  R
  CGGGCTAGCT GTGTGAGTGT GGTCTCCTAG TTCTGTGTGG AGGTGAAGAA AGGGAGCCAT
  GTTCTTTTCT TCCATCATGG ACTGTCCATA CTGTCAGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135905004	ENSMUSSNP4675441	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108025051					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131318875 () rs orientation: forward

Symbol	Name	Function Class
Gm42881	predicted gene 42881	within coordinates
Gm65089	predicted gene, 65089	within coordinates
Papss1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	within coordinates
Rr70674	regulatory region 70674	126 bp proximal
Tssr35728	transcription start site region 35728	612 bp downstream
Tssr35729	transcription start site region 35729	636 bp downstream
Tssr35730	transcription start site region 35730	660 bp downstream