rs108026003 SNP Detail

Summary

• ID
  rs108026003
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147298125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAGAACA AGGTGTGGGC
  AGGGGTTTAT TTTCTCCTGC CACTCTCACA ATTCTGTCAT GGATATCTTA CCATTTTGGA
  GAAGTTTGAG ATACTATGAA CCTGGGGGTT TTGGTGATGT TTTAATTAAT TTTATAAGTT
  CCAGAATATT TTTCTATTTT TTAAAAGATT TATTTATTAT TATATCTAAG TACACTGTAG
  Y
  TGTCTTTTAG ATACACCAGA AGAGGGCATC AGATCTCATT ACAGATGGTT GTGAGCCATC
  ATGTGGTTGC TGGGATTTGA ACTCAGGACC TTCGGAAGAG CAATCAGTGC TCTTAACCAC
  TGAGCCATCT CTCCAGCCCA AGAATATTTT TCTAAAATAA CCTCTTAGAT CCTTGGAAGT
  ATCTGTATTT GTACACAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147942991	ENSMUSSNP3064800	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108026003					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147298125 () rs orientation: forward

Symbol	Name	Function Class
Rr377375	regulatory region 377375	1057 bp downstream
Rr398768	regulatory region 398768	1486 bp upstream