rs108026396 SNP Detail

Summary

• ID
  rs108026396
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:68292731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G ACCACAGACT CATATTTTTT TCATAGAGAC TTTATGTTCT
  GATGGTTGTT ACAAGTCAGT AGATGTATTA AATACCTGTC GATGGGAAGA CTTTGGGGGG
  R
  TGGGGAGCAG GGATTAAACT GGGAATGAAG GGCCACAGAG AGCCGACTTG GTTGGCTGGT
  GTGCACAAAT ATGTTCAAGT GTGGTCGCAC GTGTCATGCG T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss147365480	ENSMUSSNP2409634	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108026396					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:68292731 () rs orientation: forward

Symbol	Name	Function Class
Ldlrad4	low density lipoprotein receptor class A domain containing 4	within coordinates
Rr393849	regulatory region 393849	1278 bp downstream
Rr540015	regulatory region 540015	1632 bp distal
Rr540016	regulatory region 540016	179 bp proximal
Tssr151775	transcription start site region 151775	526 bp upstream