rs108028230 SNP Detail

Summary

• ID
  rs108028230
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145285243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G ACTGCTTCAC CCCCATTAGT AGGTCACTGA ATATTGATTG
  TCTTTATAGC ATTTAGGAAG TATATACCAC TATAGGCTTC CATATCATCA CTCAAATACC
  C
  CTCTAATTTC CAACTGTCTC TCAGCATTTT CTTCTTCAAC CTTAACTTCC CTCCTACTTT
  CTACCTCATT TTCCCATTCA CATCTCCATC TGCCTCCAGT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147865554	ENSMUSSNP5437192	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108028230					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145285243 () rs orientation: forward

Symbol	Name	Function Class
Gm21978	predicted gene 21978	1956 bp upstream
Rr377362	regulatory region 377362	1176 bp downstream
Rr398684	regulatory region 398684	423 bp downstream