rs108032785 SNP Detail

Summary

• ID
  rs108032785
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:127127520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C GCGCACGAGC GGGGGAGGCC AGCGCAGGGG TAGTTCTCCC
  GCAGTTTTTA GGATCTCTGC GTGTTGGAGG TAGGGATGGA GCGGCTGGGC TTGCCTCTCC
  C
  TGAGAGCGTC GCCCGCACAC CTACCTCTAG CATCCAGGTG GCCACCATCC TGCGCATGTA
  CGGTTGGATG TCCTTCTGCA CGCACTTGAA ATAGGAACAC T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss133629719	ENSMUSSNP2860465	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs108032785					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:127127520 () rs orientation: forward

Symbol	Name	Function Class
9330179D12Rik	RIKEN cDNA 9330179D12 gene	within coordinates
Ccnd2	cyclin D2	within coordinates
Cpgi18033	CpG island 18033	996 bp distal
Cpgi18034	CpG island 18034	within coordinates
Cpgi18035	CpG island 18035	1078 bp proximal
Rr145781	regulatory region 145781	within coordinates
Rr399942	regulatory region 399942	1880 bp upstream
Tssr59020	transcription start site region 59020	1132 bp downstream
Tssr59021	transcription start site region 59021	314 bp downstream
Tssr63368	transcription start site region 63368	1813 bp upstream
Tssr63369	transcription start site region 63369	1783 bp upstream
Tssr63370	transcription start site region 63370	1733 bp upstream
Tssr63371	transcription start site region 63371	930 bp upstream
Tssr63372	transcription start site region 63372	907 bp upstream
Tssr63373	transcription start site region 63373	894 bp upstream
Tssr63374	transcription start site region 63374	106 bp downstream
Tssr63375	transcription start site region 63375	439 bp downstream
Tssr63376	transcription start site region 63376	475 bp downstream
Tssr63377	transcription start site region 63377	487 bp downstream
Tssr63378	transcription start site region 63378	1901 bp downstream