rs108045982 SNP Detail

Summary

• ID
  rs108045982
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:68718742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC ACACACACAC ACACACACAC
  C
  CCAGACAAAA TAAAAACAAC TGTTT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss144512316	ENSMUSSNP5038130	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss324395784	CHEV_13_68709500	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs108045982					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:68718742 () rs orientation: forward

Symbol	Name	Function Class
Mtrr	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	within coordinates
Rr1653	regulatory region 1653	905 bp upstream
Rr388642	regulatory region 388642	1489 bp downstream
Rr482077	regulatory region 482077	822 bp distal
Tg(Tek-cre)12Flv	transgene insertion 12, Richard A Flavell	within coordinates