rs108070939 SNP Detail

Summary

• ID
  rs108070939
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:73568481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGTCTTT GTTCCATGTA
  GCTGAACTTA ATGACTCTTA AAGAGTAGCT ACCCTAGTCT GCAGTTTCAC CTAATCCTCA
  ACACTTCCTA TAGTGGCCCT CTATAGTTTA TGTGGGGCAA CTGAGGAAAG TATACTAAGA
  CTTGGAAAGT CTCTCAGTTG TAGATGCCAA GTCCAAAGAA GACCTCCTTT TTTTTTTTTT
  W
  TAAAAAAAGA TTTATTTATT TATGTATTAT ATGTTAAGTA CACTGTAGCT GTCTTCAGAC
  ACTTTTTCTT CTCTTTCTGG CTCCACTCAC TCTAGCCCAA AGATTTATTT ATTTATTTAT
  TTATTATATG TAAGTACATT GTAGCTGTCT TCAGACATAC CAGAAGAAGG CATCAGGTTT
  CATTACAGAT GGTTGTGAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325448741	CHEV_17_73610826	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108070939					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:73568481 () rs orientation: forward

Symbol	Name	Function Class
Gm65147	predicted gene, 65147	within coordinates
Rr370312	regulatory region 370312	1604 bp upstream
Rr530758	regulatory region 530758	1159 bp proximal