rs108080997 SNP Detail

Summary

• ID
  rs108080997
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:9621527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTTCTTTC AATTCTACAT
  CTAATTATCT CTGCAGATTT GAAGAAGTTA ACTTATCCTC TTCATGACAT CCATATCTCT
  CATTTGAAAA CCCATACTAA AATTCCCTAA TGTATTTTTA TTTTAAAAGC CCACAAAATC
  TTCAGAGACA CTTTTCTAAT GGGACTGGCA GATACAGACC TCAGGTCCTT CCAGACTTGC
  A
  TTTCCTTTGG CAGCCCTTCT TTTGCCTAAA TTTGAGACAA GCTATGATGT GTTGGGGAAA
  ACTAAGGGCT AAAAGCTGCC ATATAGAGAG TAATATTTGA GGCCAAGTTG AACTCAAAGC
  AAACTGGTTG TCATAGTTTC CAGATGTGTG CAATCAGCAG TCACAACAAA GGGCCACCAA
  AAGTTCTCTT CATAGGAAAC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146597884	ENSMUSSNP4068716	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108080997					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:9621527 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9693	CpG island 9693	1943 bp distal