rs108093587 SNP Detail

Summary

• ID
  rs108093587
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:35113139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCATATGA GGATCCTGGG
  TTCATTATTC TTAGGACAAG CCTTGGATGT AGGACTTAAG TGGCAACTCC TTTTGACAAT
  CAGTACCATG TCTCACCAGA AAGAGTCACA GAAGTGGACA GATCCATTCT AACAGAGGAT
  AAAAACAGAA TGTGGTGGTA ACGCCACCAC CTACAACCAT CCCAGTAGGC TACTTGCTCT
  R
  TAAAGTAACA CAAGCTACAG CTATCTAGCT GATATATCAG AGAGAACAAT TAAGCTTTAC
  TCTTAAAAAG ACTTTATGAG GGGCTGGTGA GATGGCTCAG TGGTTAAGAG CGCCGACTGC
  TCTTCCGAAG GTCCCGAGTT CAAATCCCAG CAACCACATG GTGGCTCACA ACCATCCGTA
  ACGAAATCTG ATGCCCTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148903655	ENSMUSSNP2639963	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108093587					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:35113139 () rs orientation: forward

Symbol	Name	Function Class
D1Mit243	DNA segment, Chr 1, Massachusetts Institute of Technology 243	643 bp proximal
Gm53547	predicted gene, 53547	within coordinates