rs108095849 SNP Detail

Summary

• ID
  rs108095849
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:13285987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AAATTAAAGG CACCTGTTCA AAATGCAGAC GGGGATGGGG
  GGACGACGAC ACACCTTTAA TCTCAGCACA TAGAGAAACC CAATCTTATA AAAACAAAAA
  A
  GGAAGGAAAA GAAATGGAAA AGAAAAAACT GCAGCTGTGA GGAGCTCTCA GGAAGCAGCT
  CCAGGTGGTC TGTCCTGCTG TGAGGTGCTG GGGCCGAGCC A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148618473	ENSMUSSNP673521	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs108095849					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:13285987 () rs orientation: forward

Symbol	Name	Function Class
Ncoa2	nuclear receptor coactivator 2	within coordinates
Rr370880	regulatory region 370880	within coordinates
Tssr10984	transcription start site region 10984	1331 bp downstream