rs108097446 SNP Detail

Summary

• ID
  rs108097446
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127545427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGTGACACTT TTAGGATATG TGGCCTTATT TAAGAAAGTG
  TGTCACTGTG GGGATAGGCT TTGAGGTCTC TCATGTGTAG GCTCTTCTCA GTGTAGAAGA
  R
  AGCCTCCTCC TGGCTGCCTT TGAATCAAAA TGTAAAACTC TTGGCTCCTC CAGCCCCATG
  TCTGCCTGCA CTCTGCCATG TTTCCCACCA TGATAATGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147538566	ENSMUSSNP10565	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108097446					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127545427 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	898 bp distal
Gm10765	predicted gene 10765	within coordinates
Mall	mal, T cell differentiation protein-like	883 bp downstream
Tssr20034	transcription start site region 20034	1086 bp downstream
Tssr26137	transcription start site region 26137	1978 bp downstream