rs108100607 SNP Detail

Summary

• ID
  rs108100607
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:19230683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGCCACCT GAGACAATGG
  TAGAGACCTG GCCTCTGTTG CTACTGCCTC CAGGGAATAA ATATGGGTCT ATGGTGGCAA
  TCCCATGGTT AGAGTAGATG TCCATTGTCT GGGCTGCCAT TTGGAGACAT GTTGATGTCT
  AAGGGCTATG CAGAATTGTC CCCACCTCTC ACTCAGTCAT CTTTGGCATA AGCTGACACC
  R
  GACCATAATA GCAGGAGAGA TGACCTCAAC CCTAGCCAAC TGTAGTATTT GGTAGAGCAA
  TCTCTGTACA CTGCAGGAAT TGTGCATAAA CCATATGTAG GCATGGGAGA GTTAGCCTGG
  TCATTTGTCT GCTGTGTAGT GATGTAGAGG AAGAAGAGTT GTCCCGTCTA GCTTCTTGTC
  ACCTACAGCA GGCAAGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147882718	ENSMUSSNP3488723	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108100607					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:19230683 () rs orientation: forward

Symbol	Name	Function Class
Gm25762	predicted gene, 25762	644 bp downstream
Or2m13	olfactory receptor family 2 subfamily M member 13	within coordinates
Rr391422	regulatory region 391422	886 bp upstream