rs108106340 SNP Detail

Summary

• ID
  rs108106340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:55477242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTCTTTC TATATATTGG
  ATATTAGTCC TCTATCAGAT TTAGGATTGG TAAAAATCCT TTCCCAATCT GTTGGTGGCC
  CTTTTGTCTA ATTGACAGTG TCTTTTGCCT TATAGAAGCT TTGCAATTTT ATGAGGTCCC
  ATTTGTCAAT TCTTTTTGTT TGTTTGTTTT ACTTGTAATC ATTCATTCAT TTATTCAACA
  Y
  TGAAGTAAGA CTACATATTT CTGATGTTGT AAGACACTGG GAGCATCATG TTTAGAACAA
  TGGAGGTGGA CATGCCTTAA TGCAGGAGCC TTGGAAAAGG AGACAGATAA TTGAGGTATG
  CATATGCCAA CAAGATAATG GCTGATTATG GTGTTGTAAA GCAGATGGCT TTGATTGACT
  GTCCAGAAAG ACAGTCTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145790132	ENSMUSSNP4592589	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108106340					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:55477242 () rs orientation: forward

Symbol	Name	Function Class
D17Mit251	DNA segment, Chr 17, Massachusetts Institute of Technology 251	1728 bp distal