rs108110554 SNP Detail

Summary

• ID
  rs108110554
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145284739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTTTCCTTGA GTGGTAGTGT TTGTTTTTCC CCTGGGTGTT
  TATTTTATCT ACTGTGTGGT TCCTAGCTAC TCATGCAGAA TTGGTTATGA GTTTCAGCTT
  A
  CAGAGTAGGA TTTACGTCAA AAGAGACATT GGTTAGCTTT TCTTACATGG TTTGTGCCAT
  CATTCCCCTA GCATATCTGG CAGGTAGACA AGATTTTAGC C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss147865482	ENSMUSSNP3216603	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs108110554					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145284739 () rs orientation: forward

Symbol	Name	Function Class
Rr377362	regulatory region 377362	672 bp downstream
Rr398684	regulatory region 398684	within coordinates