rs108112826 SNP Detail

Summary

• ID
  rs108112826
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:48821627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGGTTTG TTCTGTATGT
  CTTAGGCTAC ACAGTACATT TGAAGTTGGT CTGGGTTATG TGGGCGTGGT GGCGCACACC
  TTTAATCCCA GCACTCAGGA GGCAGAGGCA GGTGGATTTC TGAGTTCGAG GCCAGTCTGG
  TCTACATAGT GAGTTCCAGG ACAGCCAGGG TGATACAGAG AAACCCTGTC TCAAAAAAAC
  M
  AAAAAAAAAA AAAAAAAAAA AAGAGACCCT GTTTCAAGAT GAAAAACAAA CTCCCAAGTT
  GTCTATGCTC TGTTATATTC AAACCATTGT AATTTGAGAA CAGGGGGAAA GATTTCCTCT
  CTCCCTGAGA AATACCCCAG AAAGGTAAGA TAAAGGTTTT GCCTTGTGTA TGTGTTTGTA
  TTCAATAAAT ATTATTGAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146280780	ENSMUSSNP4364088	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108112826					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48821627 () rs orientation: forward

Symbol	Name	Function Class
Gm52718	predicted gene, 52718	within coordinates
Rr376450	regulatory region 376450	30 bp upstream