rs108114526 SNP Detail

Summary

• ID
  rs108114526
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100590257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACTATGG TGCTTTAATT
  TTTCTCTTAA ACTTGGGCAA TTACAGCTAT ACATGTGCCA TTAAGCACGC CCTTAGCAAC
  GCCTCAAAGG TTTAAACAAG TCTTATGTTC ATATTCTCTC ATTAAATTAT TTTCTGGTTC
  TTCTTTGACA CATTTTCTTT TTCAATTTGG GGATATGTTC TTGAATTTGC ATCTGTAAGG
  W
  CTACACATTT CTATTTGCTA TTGATTTCTA AATTTATTAC CCTGTACTCA GAGAACACAC
  TTCTTAATGT TTTAAACTCC TTTAACTTTT GAGGTTTTTA AGGTGTGGAA AATGGCCTAT
  TTTAATGTTC CAAATAGATG TACTTTGTTG TTGTTCCAAA ATATTCTGTA CTTTGTTGTT
  ACTGGGGCTG TTTAAGAGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss137995777	ENSMUSSNP6018604	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs108114526					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100590257 () rs orientation: forward

Symbol	Name	Function Class
Gm48585	predicted gene, 48585	787 bp downstream
Gm48586	predicted gene, 48586	265 bp upstream
Rps6ka5	ribosomal protein S6 kinase, polypeptide 5	within coordinates