rs108123547 SNP Detail

Summary

• ID
  rs108123547
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8857266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTTATAC ACACATACAC
  ACATACACCT CCTACACACA TATAGACACA TTTATATACA CATACACACA GACATATAGA
  TAAACACACA CTTATACACA CATACACAAA CATATACATG CATATACACA ATACATATAA
  ACACACATCC ACATCCACAA ACACACACAC GTACACATAT ACACAAACAC ACACACTTCC
  M
  CACATACATA TGTACCTATA ATAATAAACA ATAATAAATA AAAAATGCCA AAAATTAAAA
  TCACATTCGT ATAGACTATT GGTAACTCAA GTCCAACTGT AGACTTGAGC AAAATGTTGG
  AGAGAAAGTT GGGTGGTTAA AAGTTATGCT GCTCTTGCAG ATGACCTGAG TTTGGTTCCC
  AGCACCCACA TCAGGTAACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146769128	ENSMUSSNP6035009	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
ss323246145	CHEV_10_8701320	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108123547					SNP	C	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8857266 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	1335 bp proximal
Rr223852	regulatory region 223852	1812 bp proximal