rs108127437 SNP Detail

Summary

• ID
  rs108127437
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:85321098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TGTGGCCTTG TTGGAGGTGG GGTTTTACTG TAAAGATGGG
  TTTTGAGGTT ATACATGCTC AAGCTACACC CACTATGACA CATAAGCTCC TTCTGCTGCC
  T
  GCACATCAAG ATGTAGAACT CTCAGCTTCT TCTTCTCCAG CACCATATCT GCCTGGATGC
  TGCCATGCTT CCCACTATGA TGATAAAGGA CTAATCTGCT G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss144854859	ENSMUSSNP6560987	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss145027164	ENSMUSSNP5984469	ENSEMBL	ENSEMBL_Sanger	r	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs108127437					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:85321098 () rs orientation: forward

Symbol	Name	Function Class
Gm7281	predicted gene 7281	1291 bp upstream
Gm16025	predicted gene 16025	762 bp downstream
Rr414358	regulatory region 414358	957 bp distal