rs108145731 SNP Detail

Summary

• ID
  rs108145731
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33394078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGGGGG TGGGAGTAGA
  GACAGGAGGG TAATTTGCAT TGCTAAATCC TACTAAAATC CTTGAAACGC TATTTTGGGA
  GAATTGAACA GTTTGTGATA GAGGAAGACA ACTGATATAA TTTTCTGTGC TCAACATATG
  TGCATAGACA CACCTACACA CTTATGCACA CATGCATACA TCACACAAAG TACACACCAA
  M
  AGCACCAAAC AAAGACATAC TCAAATTGTA GAGTTAAAGG TATGGCCATG GACTAATTTA
  ACAATTTAAT CATATTGCAT TGCACACACA CACACACTCA AACACACACA TCATGTGCCC
  CATAGATCAT GCAATTTTGA TTATGCAATA AAGAATAATA ATAATTCTGA TTATTTCTGT
  TATTATTGGC AATAGCAAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	DBA/1J	FVB/NJ	I/LnJ	KK/HlJ	LEWES/EiJ	MA/MyJ	NZO/HlLtJ	QSi5/Ianm	RIIIS/J	SEA/GnJ	SM/J	SPRET/EiJ	ST/bJ	SWR/J	ZALENDE/EiJ
ss130775170	NCBIM37_NT_039649_chr17_33312049	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	DBA/1J	FVB/NJ	I/LnJ	KK/HlJ	LEWES/EiJ	MA/MyJ	NZO/HlLtJ	QSi5/Ianm	RIIIS/J	SEA/GnJ	SM/J	SPRET/EiJ	ST/bJ	SWR/J	ZALENDE/EiJ
rs108145731					SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss130775170	NCBIM37_NT_039649_chr17_33312049	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33394078 () rs orientation: forward

Symbol	Name	Function Class
Or10h1b	olfactory receptor family 10 subfamily H member 1B	1312 bp upstream