rs108145782 SNP Detail

Summary

• ID
  rs108145782
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:85321780 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T GTGTGTGTCT GTGTGTGTGT GTTTCATTGT TGTTGTTGTT
  ACAAGGCTTC AAGCTGTCTT CAAAACCATG ACTCTACTGC CTTAATCTCC TCAGTGGAGT
  K
  CCTTAATCCG TGTACCCACC CCATTTCTGA CTTTTCCAGA TGTTTAGGCA GTATATAACA
  TTGAGCCTTA ATTTTGGTGT TATGCCAGGC TTCCCACATG C                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145027138	ENSMUSSNP1396588	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108145782					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:85321780 () rs orientation: reverse

Symbol	Name	Function Class
Gm7281	predicted gene 7281	1973 bp upstream
Gm16025	predicted gene 16025	1444 bp downstream
Rr414358	regulatory region 414358	1639 bp distal