rs108146015 SNP Detail

Summary

• ID
  rs108146015
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32904389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTTGCAT TCTCCTAGCA
  GGAGAATTCC TGTTAATGAT TTTGCTAGAT ACACTGTCGT CTCTGACGAG TCTCTGACGC
  GTAGGGATAC CCCTACTTGG CTGTGGATGT TAGACTCAGA CTTACCTCTG CTAACCTCAG
  AGTTTTGCTC CCAAATCTCT CCTGCCCTCA ACCTCCATCC CCATGCCCAT CCTCCATCCC
  A
  CCCCCCCACC CCCCGCCCTC CCCCATGATG TGAGAGGGAA CAAGTTCTAA GGCTCTGGTG
  TTCATGCTGT GACCCTGAAT TGATTTCACT CTGTACCCTG CTGACCCAAC CCCCTCCTTT
  TGGCCTTCTG CCCCAGAGGG GAGGAGGCAG TTGGGCCTGT GAAGGATTGG CTGACACAAC
  TGAGCTCAGC CTCCTTCAGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	CBA/J	CZECHII/EiJ	FVB/NJ	JF1/MsJ	KK/HlJ	MOLF/EiJ	NON/ShiLtJ	NZO/HlLtJ	RIIIS/J	SEA/GnJ	SM/J	ST/bJ	SWR/J
ss398037638	MGP_WTSI_17_32822360	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	CBA/J	CZECHII/EiJ	FVB/NJ	JF1/MsJ	KK/HlJ	MOLF/EiJ	NON/ShiLtJ	NZO/HlLtJ	RIIIS/J	SEA/GnJ	SM/J	ST/bJ	SWR/J
rs108146015					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss398037638	MGP_WTSI_17_32822360	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32904389 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	216 bp upstream
Rr339615	regulatory region 339615	211 bp proximal
Tssr143733	transcription start site region 143733	170 bp upstream
Tssr143734	transcription start site region 143734	195 bp upstream
Tssr143735	transcription start site region 143735	224 bp upstream
Tssr143736	transcription start site region 143736	240 bp upstream
Tssr143737	transcription start site region 143737	678 bp upstream