rs108146879 SNP Detail

Summary

• ID
  rs108146879
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114158637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACTTCAT ACCATTGGAT
  GCCTTTGAGA CTCCAAATTA GTGCTAGGGA GCTGGAAGAT CCCTGGATTG TCTCTGAGAC
  ACTCACAACC ACAGCAGAGA GCAGACACAA AGCACAGGAG CAGCCCAGGA CACACATGCC
  CTGAAGGAGG CTCCTATGAT AGCTTGTTAG CCAGGACTCG GCCTTCAGCC TTGTACTGTG
  A
  GTTATTTTTT GCATAGAGGG CGCTCCTGAG GAAGAATGAG TGGATCTGGA GACAGTGGCG
  AATCTATTTG AGAAGGATTA GGAAGTTTCT TTCTGTTGGG CAAAATATGT CAGTGAAGTA
  AGGCTTATGA CTTGAAATGA TTTATCCCAT TCTCAGAATT CCCTAACTAT TTCTTACTTG
  TTGATAACCT CATGATCTTC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138771783	ENSMUSSNP6180728	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108146879					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114158637 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv3-3	immunoglobulin heavy variable V3-3	1422 bp downstream
Tssr118065	transcription start site region 118065	1907 bp downstream