rs108147683 SNP Detail

Summary

• ID
  rs108147683
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48770078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAGGATTT CTCTGTGTAG
  TCCTGGCTGT CCAGGAACTC ACTTTGTAGC CAGGCTGGCC TCGAACTCAG AAATCCACCT
  GCCTCTGCCT CCCAAGTGCT GGGATTAAAG GCGTGCGCCA CCACGCCCGG TCAGGCCTTT
  TTCTTAAAGC TTGAGCTGCT GGCGCTGTTT CTGGAATCCT CCGTGTGGCT GTGGACAGGC
  G
  CATTTCTGGG GGTATTCTGC TGAAGGGAGG CTGAGGGGCC ATGCGTGTGC GCGCGTGTGT
  GTGCGTGTGT AGTAGTAGTA GTAGTAGTAG TAGTAGTAGT AGTAGTAGTA GTAGAATAGT
  AGTAGTAGTA TAATAATTTA TATATAATAT ACTTTGTACT AGTAGTATAG TCATAGAAAC
  AACCATTTTG AGGTGCCCCC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145717385	ENSMUSSNP1459189	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108147683					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48770078 () rs orientation: forward

Symbol	Name	Function Class
Rr370279	regulatory region 370279	716 bp downstream
Rr528303	regulatory region 528303	1354 bp distal
Tssr145120	transcription start site region 145120	641 bp downstream
Unc5cl	unc-5 family C-terminal like	within coordinates