rs108156017 SNP Detail

Summary

• ID
  rs108156017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27585263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCGACGGG AATCTGCCCA
  CTCTTAACTG TCAGGCCTGA TGCTTCACTG CCCTAACAAC ACAGAGTCCC CTAGGGAGTG
  CCAGCCTGCA GGGAGGAGAC CCTTGCTGGA CACCAGTGTC TGTGGGTGTC CCCAAGCACT
  CCGTATGCAG CTCCCCGGCG CCAGCCCTGT CACCCACCTG TCCCTGCTCC CCCCCACCCC
  R
  GGGAAGGCGC CCTCTATGGG CCATCCACTC AAGCTGAGTC AACTGCCTTA GCCAGGTTTA
  GAGTAGAAGA AACCCAGGCA GAGATGGAAT GAGTGGCTTA TACACAGACA CAGGGAGCAG
  GGGCTGAGTG CTTAGCAGCT CCGCAGATAA CAATGTCTGA GAAACCAGAG CACAGCCAAG
  CTCTCTTCCC AAAGAGCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325346738	CHEV_17_27503234	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108156017					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27585263 () rs orientation: forward

Symbol	Name	Function Class
Gm49794	predicted gene, 49794	within coordinates
Rr330083	regulatory region 330083	within coordinates
Rr337134	regulatory region 337134	within coordinates
Tssr147021	transcription start site region 147021	1802 bp upstream