rs108158481 SNP Detail

Summary

• ID
  rs108158481
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:15728006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTATATAATT TGTGATATTG TGAAAGGTGT TCTTTCCCTG
  CTTTCTTTCT CGGCATGTTT ATCCTTGAGC TTTAGTAAAG TTTCTTTTAT GAATGTGGAA
  T
  ATGTATCATA GACATTCAGA ATTGATAGTT CATCTTGGTA GATTTTACCT TTGATAAGTA
  TCCCTCCAGT CTCCTGAGAG GTTCTACCAC AGCTTGACAA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147906235	ENSMUSSNP2042860	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss147936636	ENSMUSSNP2056321	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108158481					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:15728006 () rs orientation: forward

Symbol	Name	Function Class
Gm21190	predicted gene, 21190	1448 bp downstream
Gm21847	predicted gene, 21847	within coordinates
Rr607454	regulatory region 607454	223 bp distal
Rr607455	regulatory region 607455	336 bp distal