rs108161276 SNP Detail

Summary

• ID
  rs108161276
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:48266183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAAAAAAAAA AAAAAAAAAA GGAGCAGAGC AGCCGCAGAC
  CCTGAGCCTA CTAACACTGC TATCCTGAAT TAGCTCCTGA GCTTTGCGCA GTGGCAGTAT
  S
  GTAGCCAATG AGGTTTATCC GAGGCGCGAT TATTGCTAAA CTGAATTAGC TCCTGAGCAG
  GCCAACTGCC TTCTACATGA GCCCAAGTCT CGCCCGAGCT A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133161978	ENSMUSSNP6350403	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108161276					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:48266183 () rs orientation: forward

Symbol	Name	Function Class
Gm22122	predicted gene, 22122	within coordinates
Gm30362	predicted gene, 30362	within coordinates
n-TCgca12	nuclear encoded tRNA cysteine 12 (anticodon GCA)	302 bp upstream
Tssr56117	transcription start site region 56117	22 bp downstream