rs108162029 SNP Detail

Summary

• ID
  rs108162029
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:13042217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTT AATTCTGAAT ATCTATGCCC
  M
  AAATGCAAGG TCACCCACAT TCATA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325305545	CHEV_17_13016196	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108162029					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:13042217 () rs orientation: forward

Symbol	Name	Function Class
Airn	antisense Igf2r RNA	within coordinates
Rr392300	regulatory region 392300	1784 bp upstream
Tssr142655	transcription start site region 142655	1775 bp downstream
Tssr142656	transcription start site region 142656	1242 bp downstream
Tssr142657	transcription start site region 142657	73 bp upstream