rs108171744 SNP Detail

Summary

• ID
  rs108171744
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:35113145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CACAGAAGTG GACAGATCCA TTCTAACAGA GGATAAAAAC
  AGAATGTGGT GGTAACGCCA CCACCTACAA CCATCCCAGT AGGCTACTTG CTCTATAAAG
  K
  AACACAAGCT ACAGCTATCT AGCTGATATA TCAGAGAGAA CAATTAAGCT TTACTCTTAA
  AAAGACTTTA TGAGGGGCTG GTGAGATGGC TCAGTGGTTA A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss148903661	ENSMUSSNP1651019	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs108171744					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:35113145 () rs orientation: forward

Symbol	Name	Function Class
D1Mit243	DNA segment, Chr 1, Massachusetts Institute of Technology 243	637 bp proximal
Gm53547	predicted gene, 53547	within coordinates