rs108176876 SNP Detail

Summary

• ID
  rs108176876
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:73951250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGT CTTTGAGTCA TTTTGTACCT
  S
  TGCGGTACCT CGGTAAAGCT CATTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147453960	ENSMUSSNP4702194	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss325684982	CHEV_18_73977833	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108176876					SNP	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:73951250 () rs orientation: forward

Symbol	Name	Function Class
Gm58443	predicted gene, 58443	within coordinates
Gm58445	predicted gene, 58445	1673 bp upstream
Tssr153889	transcription start site region 153889	1636 bp upstream