rs108178334 SNP Detail

Summary

• ID
  rs108178334
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:13774881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TAAATGTAGG GTCACAGTAA GGATGCTGCA CCTGATTGGC
  TGACTGGGAA AACACAAAGA GGGTGAAAAT AGGACCAGTC AGGGAAGATC TGTCAAACCC
  G
  ACATGGGGAG AGAAACCCCC CACCCGTCAA ATTGCTAAAA GATCTTAATC TCGTCCGTGG
  TCTGTCTCTG CATATACTTA ACTGGTTAAA ATGTTTAGCA A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss145197201	ENSMUSSNP2134050	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs108178334					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:13774881 () rs orientation: forward

Symbol	Name	Function Class
2700054A10Rik	RIKEN cDNA 2700054A10 gene	525 bp upstream
Gm49936	predicted gene, 49936	within coordinates
Rr392310	regulatory region 392310	1286 bp upstream
Rr522380	regulatory region 522380	114 bp proximal
Rr522381	regulatory region 522381	1760 bp proximal