rs108185429 SNP Detail

Summary

• ID
  rs108185429
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24909861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTA TAAGGAAAGC TCCCACATAT
  G
  GAGACTACAC ACTTTACTTT GTGTG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325333043	CHEV_17_24827832	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108185429					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24909861 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8738	CpG island 8738	648 bp distal
Rr339325	regulatory region 339325	within coordinates
Syngr3	synaptogyrin 3	938 bp upstream
Tssr146762	transcription start site region 146762	1000 bp upstream
Tssr146763	transcription start site region 146763	927 bp upstream