rs108188312 SNP Detail

Summary

• ID
  rs108188312
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72887197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCCT TGACTTTTAG AACATGCTGG
  K
  ACTTGTCCCC CTGGTCTCAG ACTGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss144663586	ENSMUSSNP7137274	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108188312					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72887197 () rs orientation: forward

Symbol	Name	Function Class
Igfbp2	insulin-like growth factor binding protein 2	within coordinates
Tssr7321	transcription start site region 7321	1041 bp upstream
Tssr7322	transcription start site region 7322	1070 bp upstream
Tssr7323	transcription start site region 7323	1113 bp upstream
Tssr7324	transcription start site region 7324	1162 bp upstream
Tssr7325	transcription start site region 7325	1177 bp upstream
Tssr7326	transcription start site region 7326	1207 bp upstream
Tssr7327	transcription start site region 7327	1236 bp upstream
Tssr7328	transcription start site region 7328	1539 bp upstream
Tssr7329	transcription start site region 7329	1574 bp upstream
Tssr7330	transcription start site region 7330	1588 bp upstream
Tssr12178	transcription start site region 12178	1077 bp downstream
Tssr12179	transcription start site region 12179	1120 bp downstream
Tssr12180	transcription start site region 12180	1184 bp downstream
Tssr12181	transcription start site region 12181	1205 bp downstream
Tssr12182	transcription start site region 12182	1248 bp downstream
Tssr12183	transcription start site region 12183	1269 bp downstream