rs108190905 SNP Detail

Summary

• ID
  rs108190905
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14372261 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTA GGACCGACCA AATATTCTCA
  G
  CGTCTAAGAG ATCTGAGTGT TCTTT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss138986201	ENSMUSSNP2941606	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108190905					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14372261 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6156	CpG island 6156	372 bp distal
Pxk	PX domain containing serine/threonine kinase	699 bp upstream
Rr487874	regulatory region 487874	1890 bp distal
Rr487875	regulatory region 487875	293 bp distal
Rr487876	regulatory region 487876	1231 bp proximal
Rr487877	regulatory region 487877	1674 bp proximal
Tssr124234	transcription start site region 124234	1695 bp downstream
Tssr124235	transcription start site region 124235	684 bp upstream