rs108191131 SNP Detail

Summary

• ID
  rs108191131
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7630539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTGAGATT GCATTCATAT CTACCATTAA ATTAGTAGAT
  ACTTCCATGT GTAGTGGGGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  S
  TGTCTGTCTG TCTGTCTGTG TAGGAGGTAG ACATTATGTG TCCTTGGTTG CTACTAACCT
  TAGTTCTTGG GACCAAGATC TCGGGACTGA ACCCGGAGC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	I/LnJ	KK/HlJ	LG/J	NZB/BlNJ	NZW/LacJ	QSi5/Ianm	RIIIS/J	SJL/J	SWR/J	WSB/EiJ
ss130473237	NCBIM37_NT_039636_chr17_7567489	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	G	G	G	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	I/LnJ	KK/HlJ	LG/J	NZB/BlNJ	NZW/LacJ	QSi5/Ianm	RIIIS/J	SJL/J	SWR/J	WSB/EiJ
rs108191131					SNP	C	C	C	C	C	C	C	C	C	G	G	G	C	C	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss130473237	NCBIM37_NT_039636_chr17_7567489	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7630539 () rs orientation: forward

Symbol	Name	Function Class
Gm49630	predicted gene, 49630	within coordinates
Gm64723	predicted gene, 64723	within coordinates
Rr336065	regulatory region 336065	1339 bp distal
Unc93a2	unc-93 homolog A2	within coordinates