rs108191946 SNP Detail

Summary

• ID
  rs108191946
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183833628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTCCACT GCCTAAAATC
  TAGAACCATA TTTGTGAGCC TTGTAGTTTA CTCCACAGAT AACTCCAGAG TGGCTCCATT
  CAACAAATAG TCTGAGAGAT CCCAGCTTGG CGTTAACTCG GTTGCATCTG GCTAAGCAGC
  ATATGATCTG CAGCCAGCTC TCTTGGGAAA CTGTCTTGAT GTCCCAGGAC ACCGAGGTTT
  Y
  CTTGATTTTA TCAGGGGTGC ACCTGCAAGA TGCCAGCCCT GCAAAGGTCA TTTAAGAAGT
  ACTTGCAAGT AGCTACTCCT CACACTGGGG CTACACATGC AAAGTTAAGA GTTAATTTTG
  AAGACATGAA GGGGATCTCC ACCGAGGCTG TGGTTAGGGA CCCTTCCTTT CTCTCTCTCT
  TTCCACCCCT TTTGCCTACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146417493	ENSMUSSNP2219833	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108191946					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183833628 () rs orientation: forward

Symbol	Name	Function Class
Rr425178	regulatory region 425178	within coordinates