rs108208771 SNP Detail

Summary

• ID
  rs108208771
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138573456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GAAGCCCATC CAGTCCCGTT GCTGTTTGCA TCATGACCGC
  CCCTCCCCCC ATCCTCAGTG CGGCTGACAG CGCCTCAAGG AAGTCTGCCT TCATTCACTG
  T
  GCATGTCATG TGTGTGCCAA GTTTTACATG GAGCTGTGGG ACATGCTGTA GACTAGGAAG
  AGTAATGGGG CCCTCGGAAC CACAGTTTTA GTGTCTTTAA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135957750	ENSMUSSNP4961568	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108208771					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138573456 () rs orientation: forward

Symbol	Name	Function Class
Gm54195	predicted gene, 54195	708 bp upstream
Tspan5	tetraspanin 5	within coordinates