rs108211506 SNP Detail

Summary

• ID
  rs108211506
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61315726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTGATGCT AGTCTCCTAT TTTATATCAT TAGATGCTCT
  TGTCATTCAG ATCTCATTTA GATGCTCTTG TCATTCAGAT CTCAGATTAG ATGGTTGAAT
  Y
  CCTCACACTT TATGAAATAA CTACCTAGTC ACTGGAGATC ATGTGAGCAG GCATAATAGA
  AATCATGATG ATGATGACGA TGATGTGTGC ATGTATGTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135224495	ENSMUSSNP1573769	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108211506					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61315726 () rs orientation: forward

Symbol	Name	Function Class
Gm40061	predicted gene, 40061	within coordinates
Rr72571	regulatory region 72571	526 bp distal
Rr81199	regulatory region 81199	276 bp proximal
Tssr888	transcription start site region 888	1613 bp upstream