rs108228222 SNP Detail

Summary

• ID
  rs108228222
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:150310442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGTCCTGGAA CTCACTCGGT AGACCAGGCT GGCCTCCAAA
  TCAGAAATCT GCCTGCCCCT GCCTCCCAAG TGCTGGGATT AAAGTTGTGA GCCACCACAG
  C
  CCAGCTCGTT CAATCTTCTA AGTGGGATTG AAGCATCCTC ACTTGGGCCT TTATGTTAAA
  CTTCAAAAGG TCTGAGTTTT ATCATGGGTG GTTTGAACTT T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147948877	ENSMUSSNP2871829	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108228222					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150310442 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12405	CpG island 12405	1552 bp proximal
Gm14127	predicted gene 14127	889 bp downstream
Rr567041	regulatory region 567041	1536 bp proximal