rs108235341 SNP Detail

Summary

• ID
  rs108235341
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180037865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAC CTGGCTTATA AGTATGACCG
  R
  CCCAAGGACA CTGAGCCTGG CTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146378066	ENSMUSSNP1592202	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108235341					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180037865 () rs orientation: forward

Symbol	Name	Function Class
Gm37336	predicted gene, 37336	1625 bp downstream
Gm57491	predicted gene, 57491	1211 bp upstream
Rr372536	regulatory region 372536	within coordinates
Rr424411	regulatory region 424411	within coordinates
Rr424412	regulatory region 424412	410 bp proximal