rs108236162 SNP Detail

Summary

• ID
  rs108236162
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:88131372 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGGTATACC CATCTACCAC CTACAGACAT TTGGAGTGTT
  TCGCTGTTGT GAATTTGGTC TAATGCTTGT GTTCCGTTAA TTGGGTTCCC AAAACTGCAC
  G
  AGAATCCACC ATATGAAAGT CGCTGAGGGG CCCTGCCTCC AGTTGATTCT GATTGGTAAA
  TAAAGTTGCC AACAGCCAGA GAGAGAGAGA GAGAGAGAG                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325500226	CHEV_17_88223284	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs108236162					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:88131372 () rs orientation: forward

Symbol	Name	Function Class
Gm50039	predicted gene, 50039	1129 bp upstream
Rr393080	regulatory region 393080	64 bp downstream
Tssr146214	transcription start site region 146214	1973 bp upstream