rs108236683 SNP Detail

Summary

• ID
  rs108236683
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137353402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAACACCAA TATCCACCTG TAACTCCAGC TCCCAGGAAT
  CTTATGCTTC TTACCTCCAA GTGGGCACTT GCATGTACAT ATGGATCACA CACACACACA
  C
  ACACACACAC ACACACACCT TTTAAATAGA TAAGTGTCAA GCAGTATCCA AATATATATG
  GCCTTTAACT GGGAAGGTTT TTCTGGATGA AGGCAGAGA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss145568631	ENSMUSSNP2094258	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs108236683					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137353402 () rs orientation: forward

Symbol	Name	Function Class
Cpgi822	CpG island 822	174 bp proximal
Gm70880	predicted gene, 70880	within coordinates
Rr19496	regulatory region 19496	1999 bp proximal