rs108239712 SNP Detail

Summary

• ID
  rs108239712
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6877207 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCAGTAAAAC CCTGTTGCGG CCGGCCTGCA GCTCGCAATG
  AACGGTTCAA CTGAGATGGC AACTCGGGCA AGGTGTGTGT CAAACACTTG CTCTTCATCT
  R
  GCAGTGACAT TTGGGGAGGA TCTGGGAACT TGGAGGTGGA GCGTGCTGAA GGAAGCAGGA
  TACTGCAAGT ATCCCTAGTG GGTGAGGGTC TCTGCCTTTT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145092604	ENSMUSSNP464020	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108239712					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6877207 () rs orientation: forward

Symbol	Name	Function Class
Dynlt1c	dynein light chain Tctex-type 1C	129 bp downstream
Tmem181c-ps	transmembrane protein 181C, pseudogene	295 bp downstream