rs108252321 SNP Detail

Summary

• ID
  rs108252321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:22700466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCAGCTA TGGCCACGCA
  GTAAGAATGA GAGGAGAAAA CATCCACTGG AAAATCCAAC AGGATTTTCT GACTCGCCAG
  GTGGGAAAAT GGAAGAGAAG AGGATCATAC CAACTTCTAA CTCAGACTAA TGAGTGACAA
  ATGGTCACCC GCCAAACCTG GAGTGTTGGG GTTGCAGAAG AAGAAATAGT GAGTGGGAGC
  R
  GTTTGCATGG AAATGCCCGA GGGTCTTTAA AATGGCTTCT ATGGGCAGGT AGGATAATGG
  CTGCTCTGAC TTGATTCAAA ACCATGGCAG CATTTACTAA GTAAACAACA ATGAAGACTG
  CATTCAAACT GAATTAAATG TGTGAAGTTA ATCTAAGTAT ATGTCCTGTT GAACATATAT
  ATATAAACAT AGTACTTGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146365989	ENSMUSSNP1083848	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108252321					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:22700466 () rs orientation: forward

Symbol	Name	Function Class
Apbb1ip	amyloid beta precursor protein binding family B member 1 interacting protein	within coordinates
Rr48488	regulatory region 48488	1066 bp distal
Rr48489	regulatory region 48489	within coordinates
Rr48490	regulatory region 48490	1135 bp proximal
Rr60642	regulatory region 60642	1866 bp distal
Rr372905	regulatory region 372905	261 bp upstream