rs108254871 SNP Detail

Summary

• ID
  rs108254871
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:56800283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TAAATAAAAG AGGTTAGCTA TCCAGAGAGT TTTAAGAATA
  GCAAGAGAGC CAGGCATGGT GGCGCACGCC TTTAATCCCA GCACTTGGGA AAGAGGTAGG
  Y
  GGATTTGTGA GTTCGAGGCC AGCCTTGTCT ACAAAGTGAG TTCCAGGACA GGCAGAGCTA
  TACAGAGAAG CCCTGTCTCA AAAAAGGAAA AAAAAAAAAA T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147172710	ENSMUSSNP4355259	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108254871					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:56800283 () rs orientation: forward

Symbol	Name	Function Class
Gm50289	predicted gene, 50289	567 bp upstream